MCP server for spatial transcriptomics analysis through natural language interfaces.

Awesome list for AI agent harness engineering: tools, patterns, evals, memory, MCP, permissions, observability, and orchestration.

Persistent project knowledge graph for coding agents. MCP server with semantic search, in-process embeddings, and web explorer.

AKB — Agent Knowledgebase. Organizational memory for AI agents: vault-scoped docs / tables / files unified by URI graph, served over MCP.

MCP server providing token-efficient access to OpenAPI/Swagger specs via MCP Resource Templates for client-side exploration.

Caelune (凯露恩) — Local-first retrieval for private Markdown, PDF, and Tika documents, with a Windows desktop app and read-only MCP server.｜本地优先的私人知识检索工具。

Agentic-MCP, Progressive MCP client with three-layer lazy loading. Validates AgentSkills.io pattern for efficient token usage. Use MCP without pre-install & wasting full-loading

Automatically create new skills based on past agent traces

A bio-inspired cognitive memory engine — a new paradigm for Graph RAG.

Your coding agent starts every session blank. Rekal is the memory your team is missing

Browser-native AI agents for X (Twitter): multi-account, MCP-ready, no X API key required.

Calibre library automation via FastMCP — metadata, shelves, RAG-friendly export. Companion to Calibre, not a replacement. For Cursor / Claude Desktop.

Ghidra MCP Server — 200+ MCP tools for AI-powered reverse engineering. GUI plugin + headless server, lazy tool loading, convention enforcement, batch operations, Ghidra Server integration, and Docker deployment.

MCP server for VirusTotal API — analyze URLs, files, IPs, and domains with comprehensive security reports, relationship analysis, and pagination support.

A local MCP server for agent literature work. Original-LaTeX section reads, BibTeX from arXiv metadata, and topic watches. Papers stay on disk. Search is optional.

MCP Documentation Server - Bridge the AI Knowledge Gap. ✨ Features: Document management • Gemini integration • AI-powered semantic search • File uploads • Smart chunking • Multilingual support • Zero-setup 🎯 Perfect for: New frameworks • API docs • Internal guides

MCP server connecting AI agents to ITASCA FLAC — run continuum simulations through natural conversation

🔥 Official Firecrawl MCP Server - Adds powerful web scraping and search to Cursor, Claude and any other LLM clients.

Perplexity AI search, reasoning, research, and compute - MCP server, dashboard, and multi-IDE auto-config for VS Code.

Self-hosted AI agent memory server with MCP, evidence provenance, typed claims, conflict detection, embeddings, recall, PostgreSQL, and pgvector

The definitive resource for Agent Skills - modular capabilities revolutionizing AI agent architecture

The leading, most token-efficient MCP server for documentation exploration and retrieval via structured section indexing

Comate is a desktop AI workspace that brings Claude Code into a polished, native app experience. Organize multiple projects in folder-backed workspaces, chat with AI through streaming sessions, explore files, and manage tasks — all in one place.

Kiso is a publishing engine that turns Open Knowledge Format (OKF) bundles into static websites for humans and AI agents. We also provide an MCP Server.