Sandbox
23 repos for sci · Codex · CodingClear
K-Dense-AI/
scientific-agent-skills

Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 190,000+ scientists worldwide. 165 ready-to-use validated skills plus 100+ scientific databases covering biology, chemistry, medicine, and drug discovery. Compatible with Cursor, Claude Code, Codex, Pi, Antigravity, and the open Agent Skills standard.

44k

Open-source, local-first desktop AI research workbench for scientific computing with Python/R, MCP bioinformatics tools, SSH/WSL/GPU runtimes, and OpenAI/Anthropic models.

1.1k
jaechang-hits/
SciAgent-Skills

197 bioinformatics & life science skills for Claude Code and AI agents — BixBench 92.0% accuracy. RNA-seq, single-cell, drug discovery, proteomics, and more. Powers OmicsHorizon.

362
ai4s-research/
ai4s-skills

Open-source agent skills for AI for Science: topic exploration, literature survey, experiments, paper writing, and integrity audit — driven by any coding agent.

222

Drop-in scientific plotting skill for Claude Code, Codex, Cursor, and other coding agents.

150
HeshamFS/
materials-simulation-skills

Agent Skills for computational materials science -- numerical stability, solvers, meshing, convergence, and simulation workflows.

66
awslabs/
hcls-agent-skills

Agent skills for healthcare and life sciences: genomics, imaging, claims, drug discovery, and more. Works with Amazon Quick, Kiro, Amazon AgentCore, AWS Strands SDK, Claude Code, Codex, and any Agent Skills-compatible platform.

32
matlab/
matlab-agentic-toolkit

The MATLAB Agentic Toolkit brings trusted MATLAB capabilities to AI agents, making engineering and scientific workflows agent-ready.

1k
gaasher/
Agent-Loop-Skills

Loop until it's better — drop-in agentic loops (autoresearch, scientific writing, data analysis, code/SQL/prompt optimization, red-teaming) as open-standard Agent Skills. Verification-gated; native on Claude Code, portable across Codex, Cursor & other Skills hosts.

168
shepsci/
kaggle-skill

Complete Kaggle integration plugin/skill for AI coding agents — competition reports, dataset/model downloads, notebook execution, and badge collection. Works with Claude Code, Gemini CLI, Cursor, Codex, OpenClaw, and 35+ agents via skills.sh.

86
nagisanzenin/
engram

Evidence-based learning engine — first-principles curricula, free-recall verification with receipts, FSRS-scheduled memory, and explorable artifacts. Learn anything; keep it.

1.4k
PlutoLei/
paperbanana-skill

Agent skills for academic figures and editable slide decks in Claude Code and Codex.

47
VILA-Lab/
FigMirror

An Automated AI Agent Tool for Plotting Your Data in Any Paper's Figure Style.

510
FrankS-IntelLab/
agentic-kaggle-skill

🤖 AI Agent-driven Kaggle competition workflow. Battle-tested patterns for score stabilization, submission troubleshooting, kernel workflows, and spec-driven development.

183
ashuiGordon/
stata-cli

Agent-native Stata CLI for AI coding agents (Codex, Claude Code, Cursor). Run .do files, inspect data, and return econometric results as JSON via PyStata.

56

Vestige enhances agents by deterministic root-cause retrieval that reaches backward through time to find the quiet change, decision, or service that caused today’s failure, not the lookalike.

617
foryourhealth111-pixel/
Vibe-Skills

Intelligent Skill routing and workflow orchestration for AI agents — +21.12 pp reward, −29.6% tokens on SkillsBench with DeepSeekV4Flash-VE.

3.2k

Open-source autoresearch powered by autonomous coding agents. Run Claude Code, OpenCode, and Codex with grading, shared knowledge, and multi-agent evolution. Accepted at COLM 2026.

972
cdeust/
Cortex
cdeust/CortexConnectors

Cross-platform persistent memory MCP for Codex, Gemini CLI, Claude Code, and other local MCP hosts. 36 cited neuroscience mechanisms, local-first SQLite/PostgreSQL, hybrid retrieval, decay-based consolidation, and reproducible benchmarks. Claude adds optional automatic lifecycle hooks.

72
AIScientists-Dev/
Flowtrace

Run a task with AI as a flow of steps you keep, reuse, and refine, not a one-off chat.

486

Modular plugin marketplace for Claude Code and agentic CLIs, with validated, spec-driven skills, agents, commands, and workflows for Java, TypeScript, Python, PHP, AWS, and AI.

343