Sandbox
22 repos for reasoning · Claude Code · CodingClear
frenzymath/
Danus

Orchestrating Mathematical Reasoning Agents with Fact-Graph Memory

423
fabio-rovai/
open-ontologies

AI-native ontology engine: a Rust MCP server with tools for building, validating, querying, and reasoning over RDF/OWL ontologies. In-memory Oxigraph triple store, native OWL2-DL tableaux reasoner, SHACL validation, SPARQL, versioning. Single binary, no JVM.

492
dioptx/
mcp-atom-of-thoughts

MCP server for structured AI reasoning — decompose problems into atomic thoughts with dependency graphs, confidence tracking, and interactive D3.js visualization

91
davidmatousek/
tachi

Threat modeling and AI-reasoning vulnerability detection harness for Claude Code — STRIDE + AI + MAESTRO

92

Project memory for coding agents and humans: the reasoning behind a codebase as Markdown in the repo, versioned by Git, so nothing rejected is proposed twice. No database, no daemon, no account.

155
bgreenwell/
dotagents
bgreenwell/dotagentsRules & Prompts

A proposed convention for the .agents/ directory to prevent context bloat and improve agent reasoning in complex codebases.

89
johnpsasser/
claude-code-prompt-optimizer

AI-powered prompt optimization hook for Claude Code. Transforms simple prompts into comprehensive, structured instructions using Claude Opus 4.6's advanced reasoning capabilities.

47

Synapse is a local-first personal memory operating system designed for AI agents. It provides durable, typed, and highly reliable long-term memory using only local SQLite — giving agents the ability to remember, update, and reason over facts across sessions with full user control.

63
VasiHemanth/
tokentelemetry

Token telemetry dashboard for AI autonomous and coding agents — tracks tokens, sessions, tool calls & reasoning across Hermes agent, Claude Code, Antigravity CLI, Codex & more. 100% local.

346

The fastest local AI engine for Apple Silicon. 4.2x faster than Ollama, 0.08s cached TTFT, 100% tool calling. 17 tool parsers, prompt cache, reasoning separation, cloud routing. Drop-in OpenAI replacement. Works with Claude Code, Cursor, Aider.

3.7k

oh-my-zsh for Claude Code — 16 agents, 35 commands, 32 skills, 21 safety hooks in one install. v4.0 adds an adversarial review loop: a second agent that never sees the first one's reasoning. MIT.

835
cjo4m06/
mcp-shrimp-task-manager

Shrimp Task Manager is a task tool built for AI Agents, emphasizing chain-of-thought, reflection, and style consistency. It converts natural language into structured dev tasks with dependency tracking and iterative refinement, enabling agent-like developer behavior in reasoning AI systems.

2.2k

Vibe Check is a tool that provides mentor-like feedback to AI Agents, preventing tunnel-vision, over-engineering and reasoning lock-in for complex and long-horizon agent workflows. KISS your over-eager AI Agents goodbye! Effective for: Coding, Ambiguous Tasks, High-Risk tasks

502
FlowElement-xinliuyuansu/
m_flow

A bio-inspired cognitive memory engine — a new paradigm for Graph RAG.

4.5k
rekal-dev/
rekal-cli

Your coding agent starts every session blank. Rekal is the memory your team is missing

193

Save 40%+ on agent token costs with code graphs: call graphs, dependency graphs, dead code detection, and blast radius analysis.

92
tjboudreaux/
cc-thinking-skills

28 eval-informed mental models and critical-thinking skills for Claude Code, GitHub Copilot, Codex, Cursor, and other Agent Skills-compatible tools

1.3k

Tool-to-Agent Protocol: tools can be smart without embedded LLM calls.

48

Headless product design for AI coding agents, backed by a transactional product graph | Design how it works, verify what you ship.

114
m0n0x41d/haftConnectors

Engineering decisions engine that know when they're stale. Frame, compare, decide — with evidence decay and parity enforcement. For Claude Code, Cursor, Gemini CLI, Codex and more.

1.4k