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14 repos for reproducibility · CodingClear
lllllllama/
RigorPilot-Skills

README-first research reproduction skills with bounded execution, auditable evidence, and byte-preserving README annotations.

486
mcs-cli/
mcs

Managed Claude Stack - Reproducible AI infrastructure for Claude Code

92
fcakyon/
phd-skills

PhD Research Skills for Claude Code: paper reproduction, experiment design, paper review, result comparison and more.

388
wangxin6x/
AutoVideo-Agent

Agent-friendly Markdown-to-video automation pipeline with reproducible rendering and pluggable media providers.

92
scitex-ai/
scitex-python
scitex-ai/scitex-pythonFrameworks & SDKs

Umbrella package for SciTeX — reproducible science from raw data to manuscript

85
Hanyuyuan6/
remote-gpu-trainer

An Agent Skill for the DL experiment lifecycle: RUN (a GPU you own or rent) → VERIFY the number is real → DELIVER reproducible, single-source figures and tables.

63

AIPOCH Open-Science is an open-source, local-first, model-agnostic AI research workbench for macOS, Windows, and Linux, with scientific agents, Python/R notebooks, data connectors, and reproducible provenance.

4k
YPares/
rigup.nix
YPares/rigup.nixFrameworks & SDKs

AI agents and Nix: parametrable skills/instructions and tools, packaged together in a reproducible and modular fashion

90

Keep Claude Code context clean. Open-source toolkit: drift detection, re-read dedup, integrity scoring, AST-aware reads, 15 MCP tools. 62.6% measured savings, reproducible.

46
cdeust/
Cortex
cdeust/CortexConnectors

Cross-platform persistent memory MCP for Codex, Gemini CLI, Claude Code, and other local MCP hosts. 36 cited neuroscience mechanisms, local-first SQLite/PostgreSQL, hybrid retrieval, decay-based consolidation, and reproducible benchmarks. Claude adds optional automatic lifecycle hooks.

72
pedrohcgs/
claude-code-my-workflow

A ready-to-fork Claude Code template for academics using LaTeX/Beamer + R. Multi-agent review, quality gates, adversarial QA, and replication protocols.

1.6k
limingrui679-design/
high-stakes-analytics-decision-lab

A platform-neutral analytical Skill that profiles messy data, selects case-adaptive methods, and produces source-backed visual reports for high-stakes decisions.

576
ai4s-research/
ai4s-skills

Open-source agent skills for AI for Science: topic exploration, literature survey, experiments, paper writing, and integrity audit — driven by any coding agent.

222

Open-source, local-first desktop AI research workbench for scientific computing with Python/R, MCP bioinformatics tools, SSH/WSL/GPU runtimes, and OpenAI/Anthropic models.

1.1k